EST details — SGN-E395193

Search information 
Request: 395193Match: SGN-E395193
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183280Clone name: TUS-41-M6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183280 is on microarray TOM1 spot ID 1-1-3.1.3.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86825 [cLET-44-G18] Trace: SGN-T111440 EST: SGN-E298804 Direction: 5' Facility: TIGR
Clone: SGN-C183280 [TUS-41-M6] Trace: SGN-T199483 EST: SGN-E398157 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395193Length: 496 bp (839 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395193 [] (trimmed) CAGCCTGCTTCTGCGCCTAACTGCAGAATACACCGTTTTCGGCAGGAGAGCAATTCCCCCTACAAACAAAGTCATCATGCCTGCACTTGTTGTAA
CTGAAGAAACAATGGCCTCCGAGCTATCCAAGAAAAAAATGAAGAAGACACCCAAAACTGATATTGAAACTCCTACTGATAAGAAAACCAAAGAG
AAAAAGTCAAAAAAATCCAAGATTGAGTCTGGGTCTGATTCAGAGGACGCTAAAAGGAGTAAAAAAAAAAAAAAAAAAACTCGAGCTGCTTACCA
GCGAAAATCAACCTCTGCTGGTCTGAAGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCACCTCCAA
AGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAAATCTGCATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGT
AGTCAGCCAGGGTGCGACCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395193] SGN-U577265 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196519 [Download][View] Facility Assigned ID: FA0AAD29BG03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0002 Quality Trim Threshold: 12.5