EST details — SGN-E395457
Search information |
Request: 395457 | Match: SGN-E395457 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C173475 | Clone name: TUS-16-D17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173475 is on microarray TOM1 spot ID 1-1-8.4.18.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C2662 [cLEC-16-L23] | Trace: SGN-T26924 | EST: SGN-E205035 | Direction: 5' | Facility: TIGR |
Clone: SGN-C173475 [TUS-16-D17] | Trace: SGN-T199761 | EST: SGN-E398435 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E395457 | Length: 521 bp (854 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E395457 [] (trimmed)
AATGTGCTACAATGTAGTCCATTGTCAGATTAATCAGCGAGCTCACCACAAACTAATTCAGCAGTTCTATATGTTAGTCTGCTAAGGAAATGAGA
TCACACATCCGAATGAACTGTTGTACTGATCTTTCTATGGACAAAATATACCTTCAGACAGATTAATACAAAATTATCAACATAGTAAGGTAAAC
TCACATGAAGAGTGTCGCTATAATCAAGTTTGTGAATAGTTCAAAACCATTTCTAAGGCATTTGAATAACAAGGACCAAACCTCTAATCATTTTC
TTCTACATCTTCACTGTCCTTCACTACCATATCTTCATATTTCTTCACTGCCACATTATCAACATTTTCTTCATCTGCCTCATATCGAAAACTAA
AGAGAGGATCGGACCACAGATCATCCTTGATTATCTCACCGATTTCATCAATATTATCAACTTCGCTGAACCACTTAAAGAAGCTTTGTTCATCA
ACTATCTTGCCTTGTGCCCATTGTATTGGCGATGCAGTAGTTTTAG
TCACACATCCGAATGAACTGTTGTACTGATCTTTCTATGGACAAAATATACCTTCAGACAGATTAATACAAAATTATCAACATAGTAAGGTAAAC
TCACATGAAGAGTGTCGCTATAATCAAGTTTGTGAATAGTTCAAAACCATTTCTAAGGCATTTGAATAACAAGGACCAAACCTCTAATCATTTTC
TTCTACATCTTCACTGTCCTTCACTACCATATCTTCATATTTCTTCACTGCCACATTATCAACATTTTCTTCATCTGCCTCATATCGAAAACTAA
AGAGAGGATCGGACCACAGATCATCCTTGATTATCTCACCGATTTCATCAATATTATCAACTTCGCTGAACCACTTAAAGAAGCTTTGTTCATCA
ACTATCTTGCCTTGTGCCCATTGTATTGGCGATGCAGTAGTTTTAG
Unigenes |
Current Unigene builds | |||||
[SGN-E395457] | SGN-U565244 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T196783 [Download][View] | Facility Assigned ID: FA0AAD4CB09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.953 | Expected Error Rate: 0.0010 | Quality Trim Threshold: 12.5 |