EST details — SGN-E395548

Search information 
Request: 395548Match: SGN-E395548
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183904Clone name: TUS-43-G6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183904 is on microarray TOM1 spot ID 1-1-3.3.19.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2274 [cLEC-15-G17] Trace: SGN-T26617 EST: SGN-E203516 Direction: 5' Facility: TIGR
Clone: SGN-C183904 [TUS-43-G6] Trace: SGN-T196873 EST: SGN-E395547 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395548Length: 526 bp (881 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395548 [] (trimmed) GTAGTTTATAAAGGAACTTTAGCAGATGGGACTAATGTTGCTGTCAAAAAGATTATAGAATCTGATTTTCAAGGAAATGATGAGTTTTGCAATGA
GGTTGAGATTATTAGTAACTTGAAGCATCGTAATCTTGTATCACTTAGGGGTTGTTGCGTGACAGATAAAAATCGGATTGAAAATGGGGAGAGTG
AAAGATTCCTCGTGTATGATTACATGCCCAATGGGAATCTTGAGGATCATTTATTTGCTGTAAATCAAGGTGGAATACTGAAGCAGCCGTTGACT
TGGCCTCAGAGAAAAAACATAATTTTGGATGTGGCAAAAGGACTAGCTTATCTGCATTATGGGGTAAAGCCAGCAATTTATCACAGGGACATTAA
AGCTACTAATATCCTATTAGATGAAGATATGAGAGCAAGAGTTGCTGACTTTGGGTTGGTAAAGCAAAGTAGAGAAGGACAGTCTCATCTTACCA
CCAGAGTGGCAGGAACACATGGCTACTTAGCTCCTGAATATGCTCTCTATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395548] SGN-U563765 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196874 [Download][View] Facility Assigned ID: FA0AAD31BD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5