EST details — SGN-E395899

Search information 
Request: 395899Match: SGN-E395899
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174247Clone name: TUS-18-D21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174247 is on microarray TOM1 spot ID 1-1-4.4.16.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7448 [cLEC-38-P22] Trace: SGN-T31754 EST: SGN-E209219 Direction: 5' Facility: TIGR
Clone: SGN-C174247 [TUS-18-D21] Trace: SGN-T197226 EST: SGN-E395900 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395899Length: 704 bp (821 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395899 [] (trimmed) GATGAAGATTATCTATTTATATTACATTGATCTTGCTTTCTGCACTGCATTAAACATGTAAAATCTTGTGAAGGTATTTAGTTTCTGCAGCTGTA
CATTGGAAGTAATTTCACCTAGGCCTCAATTAGTTCTCTAATTGGTTTTCTGTTTATGTTAACGAATGGGATATCAGTGAATTCTGAGAGTATAG
CTCTAAACTCATCTCCTGTAAGAGTCTCCTTTTCCAGCAGGACATCCACTAATTTGTCGATTGCCTCCCTGTTGTTCCTGATGTGGTTCTTTGCA
ATTTCATGCTCTCTCGATTATGTGCCTTACAGATTCATCAATGTCTTCTGCTAGTTTCTCTGACATTTGATTCCTCGCTAGCATTCTCAGCACCA
CATCGCCACTTTGTGCTGCTGGATCTGTTAACGCCCATGGTCCAATCTCAGACATCCCAAACATTGTAACCATCTGCTCAGGTTGCGAATATTGA
CAAGTGAAAACTTGTGAGTATTCGACTATGTTGTTTTCTTTAGTAGGTGCAACAAGAAAATGTGCTTGAGTGAATACCTGTCTTGCTATTTGAGT
TATTTGTTGCAAGTCTCCTGCTGCACCAGTAGTGATTTCTGGTTCACCAAAAATTATTTCCTCTGCTGCTCTACCTCCTAAGCCTCCCACTATTC
TAGCAAAGAGTTGCTTCTTAGAGATTAAAGTTGGATCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395899] SGN-U564706 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197225 [Download][View] Facility Assigned ID: FA0AAD6CB11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5