EST details — SGN-E395901

Search information 
Request: 395901Match: SGN-E395901
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174275Clone name: TUS-18-F1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174275 is on microarray TOM1 spot ID 1-1-8.2.16.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7799 [cLEC-40-E8] Trace: SGN-T32140 EST: SGN-E210076 Direction: 5' Facility: TIGR
Clone: SGN-C174275 [TUS-18-F1] Trace: SGN-T197228 EST: SGN-E395902 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395901Length: 721 bp (852 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395901 [] (trimmed) AGCAAAGCCCCTGAATCGAAGACTGTTATTTAAAGTAAGTGTCTTCCCCAGCCAAGAAAATGGCTTAATTCAGTTTTAGAAACATAGAGATTCAC
ATGCATTGGAAGTCATATGACATATCTTCCCTCACTTTTTAACATTTCTCTACAAATCATAAAGCTCATTGCAATAGAGAAGTTATCAACTAGTT
GATAACAGAAAGAGTTGGCAATAACAGATAGAAGGCCAACTAATAACAAAGCCTTCATGCTGATGAGAACAGCAGTCGGCTTAGTAGTGTTGTGA
CCAGTTAGCAGCACTACCCACTCTGGGCATGCCTGAATCCACTTTCTTAGACTCTGGGTCCACCTTAAAATTTGCTCCACACACCTCGCCTGAGC
TGTCCACCCTCGGTACTGATTTCAACTCATTGCGTGGGTGTTCATAACTCCTCAAGCCACCAGAAGATGTGAAAAAGCACCCTTTGGGAAATGGT
GAAAAGGATTTCCCACAGCCTTGTTTCACAATGTCAGCATCATCTGAGAGAACTAGGTGGCCTTCAGAATCAGTACCCCAGAAGAAGGGCACACA
GCCATCAACATCAGAAGCTAGAAAGGTACTCTTAGAAGCGCAATCATAAAGAACGAATGCAAACTTTCCATGAATATCCTTCACAACCTGATCTG
GAGGATAAGGACCTCTATCCCTCAAAGTCCTGTAAACCTCAATAACAATGATCACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395901] SGN-U577532 Tomato 200607 Build 2 85 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197227 [Download][View] Facility Assigned ID: FA0AAD6CC01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5