EST details — SGN-E395981
Search information |
Request: 395981 | Match: SGN-E395981 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C174198 | Clone name: TUS-18-B20 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174198 is on microarray TOM1 spot ID 1-1-5.2.16.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C174198 [TUS-18-B20] | Trace: SGN-T197306 | EST: SGN-E395980 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E395981 | Length: 686 bp (873 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E395981 [] (trimmed)
TTCCGCACGAGAGTTCCTACAGTTATAATAACAAACAACAATTTCTACCAAAGTTTTTCAAATTCTAAATTTCATCAAAAAAACAACAACAATGG
TGGTCTTAACAAAACCTGCCATTACTCACTTCCCTATAGTGAAAAACTCTTTCAAATCACCCTCTTACATCAATGATATCCCTGTAATAGACCTC
TCTAAAGCCAACTCCAAGAACCTCATCGTTAATGCCTGCGAATAATTCGGATTCTTCAAAGTCATAAACCATGATGTTCCTATGGAATTCATAAG
TAAACTCGAATCCGAAGCCGTTAAATTCTTCTCCTCTCCCCTCTCTGAGAAACTAAAGGCAGGGCCTGCTGATCCTTTTGGTTATGGCAATAAGA
AAATCGGACAAAATGGCGATATCGGTTGGGTTGAATACATTCTCCTTTCAACAAATTCTGAATTCAATTACCAGAAATTCGCATCTGTATTAGGT
GTCAATCCAGAAAACATTCGGGCTGCGGTGAATGATTATGTGTCATCAGTGAAGAAAATGTCATGTGAGATTCTTGAAAAGTTGGCGGAGGGATT
AAAGATTCAACCGACGAATGTTTTGAGTAAGCTATTGATGGATGAAAAGAGCGACTCTGTTTTCAGGCTGAATCACTATCCTCCATGTCCTGATA
TTCAAGAATTCAATGCCAAAA
TGGTCTTAACAAAACCTGCCATTACTCACTTCCCTATAGTGAAAAACTCTTTCAAATCACCCTCTTACATCAATGATATCCCTGTAATAGACCTC
TCTAAAGCCAACTCCAAGAACCTCATCGTTAATGCCTGCGAATAATTCGGATTCTTCAAAGTCATAAACCATGATGTTCCTATGGAATTCATAAG
TAAACTCGAATCCGAAGCCGTTAAATTCTTCTCCTCTCCCCTCTCTGAGAAACTAAAGGCAGGGCCTGCTGATCCTTTTGGTTATGGCAATAAGA
AAATCGGACAAAATGGCGATATCGGTTGGGTTGAATACATTCTCCTTTCAACAAATTCTGAATTCAATTACCAGAAATTCGCATCTGTATTAGGT
GTCAATCCAGAAAACATTCGGGCTGCGGTGAATGATTATGTGTCATCAGTGAAGAAAATGTCATGTGAGATTCTTGAAAAGTTGGCGGAGGGATT
AAAGATTCAACCGACGAATGTTTTGAGTAAGCTATTGATGGATGAAAAGAGCGACTCTGTTTTCAGGCTGAATCACTATCCTCCATGTCCTGATA
TTCAAGAATTCAATGCCAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E395981] | SGN-U578575 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T197307 [Download][View] | Facility Assigned ID: FA0AAD6DA10RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.963 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |