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EST details — SGN-E395994

Search information 
Request: 395994Match: SGN-E395994
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174250Clone name: TUS-18-D24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174250 is on microarray TOM1 spot ID 1-1-1.4.16.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7718 [cLEC-40-A10] Trace: SGN-T32041 EST: SGN-E209977 Direction: 5' Facility: TIGR
Clone: SGN-C174250 [TUS-18-D24] Trace: SGN-T199867 EST: SGN-E398541 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395994Length: 602 bp (858 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395994 [] (trimmed) AAGTTCCTACAGTTATAATAACAAACAACAATTTCTACCAAAGTTTTTCAAATTCTAAATTTCATCAAAAAAACAACAACAATGGTGGTCTTAAC
AAAACCTGCCATTACTCACTTCCCTATAGTGAAAAACTCTTTCAAATCACCCTCTTACATCAATGATATCCCTGTAATAGACCTCTCTAAAGCCA
ACTCCAAGAACCTCATCGTTAATGCCTGCGAAGAATTCGGATTCTTCAAAGTCATAAACCATGATGTTCCTATGGAATTCATAAGTAAACTCGAA
TCCGAAGCCGTTAAATTCTTCTCCTCTCCCCTCTCTGAGAAACTAAAGGCAGGGCCTGCTGATCCTTTTGGTTATGGCAATAAGAAAATCGGACA
AAATGGCGATATCGGTTGGGTTGAATACATTCTCCTTTCGGCAAATTCTGAATTCAATTACCAGAAATTCGCATCTGTATTAGGTGTCAATCCAG
AAAACATTCGGGCTGCGGTGAATGATTATGTGTCATCAGTGAAGAAAATGTCATGTGAGATTCTTGATAAGTTGGCGGAAGGATTAAAGATTCAA
CCAACGAATGTTTTGAATAACCTATTGATGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395994] SGN-U578575 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197320 [Download][View] Facility Assigned ID: FA0AAD6DB12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0106 Quality Trim Threshold: 14.5