EST details — SGN-E396012
Search information |
Request: 396012 | Match: SGN-E396012 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C174330 | Clone name: TUS-18-H8 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174330 is on microarray TOM1 spot ID 1-1-1.4.16.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C7976 [cLEC-40-O10] | Trace: SGN-T32273 | EST: SGN-E210209 | Direction: 5' | Facility: TIGR |
Clone: SGN-C174330 [TUS-18-H8] | Trace: SGN-T197339 | EST: SGN-E396013 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E396012 | Length: 368 bp (865 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E396012 [] (trimmed)
AGAAGTTGCTTTTTTTTAATCTTAGGATCTGAAAAGCAATAAGCTGCTTTTAAAATGGTATTCTATTACATTCTCAAAAGCCTTCAAAGATAAAC
GAGTCGGCCTAACAGATACAACAGTTTCTGGCAACATAAATGATTTTGAAAGATTTAAATGGACGAAAACCACAAACTCAAAAATCAGCACGAAA
AGTCGAATTTTCGTACCATGCAATTAAAGGTAGGTTCTATGACTTCGGTTCATCAACCCATGTTGGGTGGTGGAGGTGGTGGGCGCATTCCTTGG
CCTTGCATCTGTTGTTGACCTGGAAAACCTTGTGGAGGCATCATTGGAGGTCTACCCTTTTTTCCACCTGGAGTGAAATTAGC
GAGTCGGCCTAACAGATACAACAGTTTCTGGCAACATAAATGATTTTGAAAGATTTAAATGGACGAAAACCACAAACTCAAAAATCAGCACGAAA
AGTCGAATTTTCGTACCATGCAATTAAAGGTAGGTTCTATGACTTCGGTTCATCAACCCATGTTGGGTGGTGGAGGTGGTGGGCGCATTCCTTGG
CCTTGCATCTGTTGTTGACCTGGAAAACCTTGTGGAGGCATCATTGGAGGTCTACCCTTTTTTCCACCTGGAGTGAAATTAGC
Unigenes |
Current Unigene builds | |||||
[SGN-E396012] | SGN-U579036 | Tomato 200607 | Build 2 | 45 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T197338 [Download][View] | Facility Assigned ID: FA0AAD6DD04FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.957 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |