EST details — SGN-E396123

Search information 
Request: 396123Match: SGN-E396123
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174841Clone name: TUS-19-M15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174841 is on microarray TOM1 spot ID 1-1-2.1.15.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23661 [cLED-6-A14] Trace: SGN-T50227 EST: SGN-E233241 Direction: 5' Facility: TIGR
Clone: SGN-C174841 [TUS-19-M15] Trace: SGN-T197448 EST: SGN-E396122 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396123Length: 726 bp (902 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396123 [] (trimmed) CGGATTTACTTGGGCAAACAATTGGAGAATCATAAAGTCACAATTTCTCGTATTGCTGATTTGCTAGGAAATGCAACTTCAGCCAAAAATCACTT
AAATAAATGTCTTTTCATTGTTGGAATAGGCAGCAATGACTACATCAATAATTTTCTAATGCCAGATGTATACCAATCAAGTCATTTGTACTCAC
CAAGTCAGTATGCAACACTTCTCATTCAGCAGTACTCCCAACAATTAAAGGAATTGTATTCAGATGGAGCAAGGAAAATAGCACTTTTTGGACTA
CCTCAAATAGGTTGCATTCCAGATCAATTGAACCAACACAGCACAATTTTTTGTGTGGATTCAACAAATAAAGCAGTTCAATTATTCAACAAAAA
CTTAAAAGCTCTTGTTGATGATCTCAATACTAATTTCCCAGATGCAAAATTCATATACATAAACATGTATAGCATCTCATCAGCGATTGCTATAA
CTCTATTGAATAATCCATGCTGTCAAATTTCTAAAACTATGCCTGAAGGACAATGTATTCCAGGAAAATCTCCATGTCTGTTTAGGGCTACACAT
TTTTTTTATGATAATTTCCATCCCACTGAAATTGGAAATAATATAGCTACGAGTAGAGCTTACAGAGCTCTTCTACCGTCTGATTCTTATCCAAT
GGATATTCGTCATTTGGTGAGGGCCAATAATGTGTACTATGATGATCAGTAAAATTTCAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396123] SGN-U580582 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197449 [Download][View] Facility Assigned ID: FA0AAD7AG08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.952 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5