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EST details — SGN-E396214

Search information 
Request: 396214Match: SGN-E396214
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176826Clone name: TUS-24-P8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176826 is on microarray TOM1 spot ID 1-1-1.4.9.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27964 [cLEF-46-C21] Trace: SGN-T61605 EST: SGN-E247194 Direction: 5' Facility: TIGR
Clone: SGN-C176826 [TUS-24-P8] Trace: SGN-T199893 EST: SGN-E398567 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396214Length: 674 bp (871 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396214 [] (trimmed) CAGTCGTGTTGGTACTGCTGATCAGTCCTCGGTTCCCTCTGTTACTCAGAGAGTTGCCAGGACCAATGCTGATATCCCAAGACCAGGATCTTTTG
TCCCTCCATTCCTTGTTGGTCACGGTTCTGCTGCCAGAGCTGGAAGTTCAGTTGCTTCACCAATGATACCTCCTTATCCTGGAAGTGTAGCTCGG
GCTCGTGACCGTGTTCAAGCTCTTCAAGCCTATTTTCAGCAACCAAGTAATTCACCAGCTGTACGCACTCCTGTTATGTCTGCTACTCGACGATC
CAACAATCACAGAGGGTTGGCTCAAGTGGGGCCGGCTGCCTCATCATCTGATCAGGCTGGTGGCTTCTACTTCTATCCTTCAAGTTCTTCAGGAA
GAAATTTCCAAGAAGCAGAAAATCCAGTATCAAACAGATATCACGCTTGGGAACGAGAACACTTGCCCGCCTTCCCCTTGAGTCAGGTTGACAGA
GATCCTATTTGGGGGCCATTTCATCACACAGGTGTTGGATCTGATAGTGGTAGCCGAGCTGGCAGCTTCCGACCGAGACATGGGTCTGAGAGGAT
GCCGTCCCAGAACCGGTCATGAACTTCTGTGCTGTTTTGATGAGAACTGTGATTACTTTGAATGAACCCAATTTATGTATGTTTTGAGAAAACGA
TCTAAAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396214] SGN-U580180 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197540 [Download][View] Facility Assigned ID: FA0AAD12DH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5