EST details — SGN-E396322

Search information 
Request: 396322Match: SGN-E396322
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185323Clone name: TUS-47-B9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185323 is on microarray TOM1 spot ID 1-1-8.2.9.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73519 [cLER-5-C16] Trace: SGN-T93017 EST: SGN-E279508 Direction: 5' Facility: TIGR
Clone: SGN-C185323 [TUS-47-B9] Trace: SGN-T192222 EST: SGN-E390896 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396322Length: 689 bp (830 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396322 [] (trimmed) ATGTAAATGCTACTGCTTAATGACAAAAATGGTACTGAAAATGGACTGGGGTGTGGGGTGTTGTCACAATGCATTACAAGAGTGAGCTTGTTGCG
GCTGCCTGAACAATAGAAAATAGAAATAAAAGAAAAAAACTAGACTCAGCAGTTTCAAGCACCACTAACCTCACACTGCACTTTTCTTGCTCCTG
AAATTCTCTTTGAGTAATGCAAACTTTTTTTACACTGGTTCATAGTCTTCCCAGGGACAGCAGTTGCCACTCGTTCCCACCGCTGGCTGGTTTCC
TTGGGGAAGGTTTTCAGAGCTTGAACTAAGGCTTTTTCTTGAACAGCAGACCATACGTCTGAATCAGAACTCGAAGAAACTCCGTTTGCTGTAGG
TGCATCCTCAGTGTTCTGGCTGTTTGTGTTTTGACTAGGGGTCTCCTGAGAATCAGCTACTTTGGCGCTTCCACTTTCAGGCTTGCTACTATTTT
CTACTCCCTCTACTTCTGCCCTCGTGGAAAGAGGAGAAACAATAGTTGGTGCAGGCTTTCTTTTCTCAAGGAAGGAGTCAAAGGCTTTAGCAGAG
TCGGGCTTCTGGAGCAGAACTGTTTTTGTAGCCTTCAGGATCTCTTCAACTGTCCTTGCGGTACCAATATAATCAAAAATAACTTCCCATCTTCG
AAAAATTCCTTTAGAATATTTCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396322] SGN-U575934 Tomato 200607 Build 2 79 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197648 [Download][View] Facility Assigned ID: FA0AAD35CA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0052 Quality Trim Threshold: 12.5