Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E396325

Search information 
Request: 396325Match: SGN-E396325
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184938Clone name: TUS-46-B8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184938 is on microarray TOM1 spot ID 1-1-1.2.12.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396325Length: 697 bp (881 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E396325 [] (trimmed) GAAGAAGCAATATGGCTTCCTCTGTCATTTCTTCAGCAGCTGTTGCCACACGCAGCAATGTTACACAAGCTAGCATGGTTGCACCTTTCACTGGT
CTCAAATCTTCAGCCACTTTCCCTGTTACAAAGAAGCAAAACCTTGACATCACTTCCATTGCTAGCAATGGTGGAAGAGTTAGCTGCATGCAGGT
GTGGCCACCAATTAACATGAAGAAGTACGAGACACTCTCATACCTTCCTGATTTGTCTGACGAGCAATTGCTTAGTGAAATTGAGTACCTTTTGA
AAAATGGATGGGTTCCTTGCTTGGAATTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCAGGATACTATGATGGAAGGTAC
TGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAAGTGTTGGCTGAGGTTCAAGAGGCTAAAAAGGCATACCCACAAGCATG
GGTCAGAATCATTGGATTCGACAATGTGCGTCAAGTGCAGTGTATCAGTTTCATTGCCTACAAGCCAGAAGGCTACTAAGTTTCATATTAGGAAC
AAAATTGTCTTTAGGGACACTTTGTTTTTAAATGCTACTTAGGTCCTTTTTTCTTTTTTGTCTTATTTCCCAACAAACTCTTTGTGTCTTGTACT
ATTCGGTTTATGTTTTTGGATTTATGAGTACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396325] SGN-U578689 Tomato 200607 Build 2 989 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197651 [Download][View] Facility Assigned ID: FA0AAD34DA04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0098 Quality Trim Threshold: 14.5