EST details — SGN-E396436

Search information 
Request: 396436Match: SGN-E396436
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C186039Clone name: TUS-48-P5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C186039 is on microarray TOM1 spot ID 1-1-4.4.7.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78127 [cLES-4-I14] Trace: SGN-T97891 EST: SGN-E282150 Direction: 5' Facility: TIGR
Clone: SGN-C186039 [TUS-48-P5] Trace: SGN-T192816 EST: SGN-E391490 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396436Length: 574 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396436 [] (trimmed) CAGAGGTACATGTCAGACTGGTGATTGTGGTGGAGTCTTACAGTGTACCGGATGGGGCAAACCCCCAAACACCCTAGCCGAGTACGCCTTGGACC
AGTTTAGCAACTTAGATTTTTGGGACATTTCTTTAGTCGATGGATTTAATATTCCAATGACTTTTGCCCCAACAAAACCTAGTGGAGGAAAATGT
CACGCAATTCATTGCACGGCCAATATAAATGGTGAATGTCCTCGCGCCCTTAAGGTACCTGGAGGATGTAACAACCCTTGTACCACGTTTGGAGG
ACAACAATATTGTTGCACCCAAGGTCCATGTGGCCCTACAGAGTTGTCCAAATTTTTCAAGAAAAGATGTCCCGATGCTTATAGCTACCCACAAG
ACGATCCTACAAGCACATTTACTTGCCCTGGTGGTAGTACGGGGGGGAGGGTTGTCTTTTGTCCTAATGGTGTTGCTGATCCAAATTTCCCCTTG
GAGATGCCTGCAAGTACTGATGAAGTGGCCCAGTGAAATTTGAGTTTCTTCATTTTAATTCGCCCTCATTAATCAACTGATCTCTACCGTATTGA
AAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396436] SGN-U579414 Tomato 200607 Build 2 213 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197762 [Download][View] Facility Assigned ID: FA0AAD36CH03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5