EST details — SGN-E396571
Search information |
Request: 396571 | Match: SGN-E396571 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C184052 | Clone name: TUS-43-M10 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184052 is on microarray TOM1 spot ID 1-1-7.1.18.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C3578 [cLEC-21-A7] | Trace: SGN-T27986 | EST: SGN-E205663 | Direction: 5' | Facility: TIGR |
Clone: SGN-C184052 [TUS-43-M10] | Trace: SGN-T199913 | EST: SGN-E398587 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E396571 | Length: 354 bp (940 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E396571 [] (trimmed)
TTATTTAATATTAGTAATATCGCAAAACGCATGGTTCTTAGTATATCCTAACATTAACATATACCTATTTAATTTAAACTTTATAGGGACAAAAC
AAAAAACAATAGTAGGCTACCATCATTGCCTAATAATAAAATGTGGAAGTCAAATTTATACTTTGATACCAAACCTAAAAATGCTTTAATGCAAA
CTCCAAGTCAAAATAATACAAAATTTGTACACCATCTCTATCAAGCTACCTACACTACACTTGATCAAAGTTCCAAAGACCCTCCTCAAAATCTA
TATCTATCTCAAGATTATCATTGTTGCTAGTAGTAGTACAAGAAAATTTTTTTTCAGATGACATAACAT
AAAAAACAATAGTAGGCTACCATCATTGCCTAATAATAAAATGTGGAAGTCAAATTTATACTTTGATACCAAACCTAAAAATGCTTTAATGCAAA
CTCCAAGTCAAAATAATACAAAATTTGTACACCATCTCTATCAAGCTACCTACACTACACTTGATCAAAGTTCCAAAGACCCTCCTCAAAATCTA
TATCTATCTCAAGATTATCATTGTTGCTAGTAGTAGTACAAGAAAATTTTTTTTCAGATGACATAACAT
Unigenes |
Current Unigene builds | |||||
[SGN-E396571] | SGN-U578656 | Tomato 200607 | Build 2 | 73 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T197897 [Download][View] | Facility Assigned ID: FA0AAD31BG05FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.897 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |