EST details — SGN-E396637

Search information 
Request: 396637Match: SGN-E396637
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183972Clone name: TUS-43-J2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183972 is on microarray TOM1 spot ID 1-1-7.2.19.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17577 [cLED-1-E3] Trace: SGN-T48481 EST: SGN-E226969 Direction: 5' Facility: TIGR
Clone: SGN-C17577 [cLED-1-E3] Trace: SGN-T48482 EST: SGN-E226970 Direction: 3' Facility: TIGR
Clone: SGN-C183972 [TUS-43-J2] Trace: SGN-T197962 EST: SGN-E396636 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396637Length: 451 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396637 [] (trimmed) ATCAAACCTTTTCCCTTAATAGAATATCATCGCGTTCATAAACAGAGTACATTCACAAATCAAATAGAAAGCAGTTAAACACAAGATACTGATAC
ACAGAGATAGTAAATTAATCCGATCAGATCTAATCACTGTCGCTGCTGCTGCTACGATCATGTCCGTCATGTTTCTTCTCCTTTTTGTCTTTCTT
CTTCTTCTTCTTCTCTTTTCCATCCTTGTGATTCTCTCCACTTTCTTCTCCATGGATCTTATCTTTTATCTTCTCAACAAATCCTTCCTTATGCT
CATCCTTCTTGTGTCCTTCTCCCTTGGGTTCCTCTTTTTTGTGTTCTTCTTCCTTATGGCCACCTCCGATGTGGAGTTTCTCTTCAATTTTGTGG
ATGATTCCTGCCATTGTTAGATCAGAGATGAGAAATTGAGTTTTTTTTTTTTGGGGGGGGTTGCAGGGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396637] SGN-U580212 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197963 [Download][View] Facility Assigned ID: FA0AAD31DE01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.926 Expected Error Rate: 0.0072 Quality Trim Threshold: 14.5