EST details — SGN-E396730

Search information 
Request: 396730Match: SGN-E396730
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184067Clone name: TUS-43-N1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184067 is on microarray TOM1 spot ID 1-1-8.2.19.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5840 [cLEC-33-E24] Trace: SGN-T30238 EST: SGN-E206966 Direction: 5' Facility: TIGR
Clone: SGN-C184067 [TUS-43-N1] Trace: SGN-T198057 EST: SGN-E396731 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396730Length: 229 bp (889 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396730 [] (trimmed) TTTACCTTTTTCTATATAAAACTCAGAAATACAAAAATATCTTAAATAACAGACTCTTGGAGACGAAGTGCATACTCCAGTTTCCACAACACATC
ACCCATTGATGGCCTATCTTCACTAGACAAAGCTAAGCATTTTACCGCTGTATCTCCAAACTTCCTGAGGGACTCTGGTCTTATTTTATCTGCAA
GATTGGGATCTACGATTTGTTCCCACTGTCCATTATTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396730] SGN-U577094 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198056 [Download][View] Facility Assigned ID: FA0AAD31CG01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5