EST details — SGN-E396858

Search information 
Request: 396858Match: SGN-E396858
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184348Clone name: TUS-44-I18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184348 is on microarray TOM1 spot ID 1-1-7.1.16.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20194 [cLED-29-K11] Trace: SGN-T56200 EST: SGN-E239912 Direction: 5' Facility: TIGR
Clone: SGN-C184348 [TUS-44-I18] Trace: SGN-T198185 EST: SGN-E396859 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396858Length: 434 bp (888 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396858 [] (trimmed) AAAGCTTTTATAGGTGTTGATAAATTAAATGAACTTGTTCACTTTTTTTCATTCAAATATTGTTACTACACATTTACCTATACATGATTTGTACC
ATTAAAATACTGACTATTAAAATCTTGTAATTATATACAATAATTCCATAAAGGCATATAAGCGTGCACATCAACTAATTCACCGTAATGGTCTC
CGATCTCTAAACATTGGGGAGGAGGTAGCATGAGTCCTTCTGCCATATTTGCAAGTAATCCTGGCATGGAAAACAACGCTTCCTCATCCACGAAG
TCACTACTCTCTTGCACATTTTCTGACGTTTCAGGAGATTCTCCTGAAACTTCTTCCGATCGAAAGATTTCGGCGGGTTTATCAATTCTGCCTTT
CTTTTGCTTTATCCAAAAAGCCAAAATCTTATTCCGATGAAAAGTCCCCGAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396858] SGN-U570402 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198184 [Download][View] Facility Assigned ID: FA0AAD32BE09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0139 Quality Trim Threshold: 14.5