EST details — SGN-E396901

Search information 
Request: 396901Match: SGN-E396901
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184482Clone name: TUS-44-O8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184482 is on microarray TOM1 spot ID 1-1-1.3.16.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184482 [TUS-44-O8] Trace: SGN-T198228 EST: SGN-E396902 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E396901Length: 650 bp (852 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396901 [] (trimmed) AATACAATTCTTGGAAACTTGATTGATATTCCAATTAATCCTACACCGAATAAAAACATGGAAAACAAGGGAAAATGAATACAATTTCTCAAGGG
AAAACCCAAAGGATAATTCAAACAAACTGTCCCTATAAACATAGGGCAATTAGTTTTTCTAGAACTTATTATCCTTCGGGCTTGTAAGCGATGAA
ACTGATGCACTGCACTTGACAAACATTGTCGAATCCAATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAAA
CCTGGGTTGCATCAATGCACCCAAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCACGGTAC
ACAAATCCGTGCTCAGTCTCGAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATC
AGGAAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGAGGTAA
TGTCAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCGGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTACCTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396901] SGN-U580869 Tomato 200607 Build 2 1124 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198227 [Download][View] Facility Assigned ID: FA0AAD32BH04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0124 Quality Trim Threshold: 14.5