EST details — SGN-E396902
Search information |
Request: 396902 | Match: SGN-E396902 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C184482 | Clone name: TUS-44-O8 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184482 is on microarray TOM1 spot ID 1-1-1.3.16.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C184482 [TUS-44-O8] | Trace: SGN-T198227 | EST: SGN-E396901 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E396902 | Length: 615 bp (853 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E396902 [] (trimmed)
AAAGAAGGTTCACGCACCAAACCTCTCACAAGATGAACAGTACATATATGGGCTCAAATCTCAATAGGAAAGAAAAGCTTGTTACTACTAGCATA
AAGTTTCAAAATTTGAATCTCAAAAAGGAATATCAATGAAGACTAAAATTCAGCAAAAGCAGATATGCCTTGACATCATTTCTAGATGTAAACAT
CAAAATAGAAACACTCAAGTTCACATTCCGGTAAAAGCTTTTTTCCCAACACCACCAGAACCGGCTGGAATCACCTTCAATACATTGAACCTCAC
AGTTTTGGATAAAGGCCTGCGGTTTTCAGCAATGGCTTCTTCAGTAATGTCCTCAGCAGCTGTTGCCACCCGCGGCAATGGTGCACAAGCTAGCA
TGGTTGCACCCTTCACTGGACTCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGA
AGAGTCAGTTGCATGCAGGTGTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAG
CGAAATTGAGTACCTATTGAAAAATGGATGGGTTCCTTGCTTGGA
AAGTTTCAAAATTTGAATCTCAAAAAGGAATATCAATGAAGACTAAAATTCAGCAAAAGCAGATATGCCTTGACATCATTTCTAGATGTAAACAT
CAAAATAGAAACACTCAAGTTCACATTCCGGTAAAAGCTTTTTTCCCAACACCACCAGAACCGGCTGGAATCACCTTCAATACATTGAACCTCAC
AGTTTTGGATAAAGGCCTGCGGTTTTCAGCAATGGCTTCTTCAGTAATGTCCTCAGCAGCTGTTGCCACCCGCGGCAATGGTGCACAAGCTAGCA
TGGTTGCACCCTTCACTGGACTCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGA
AGAGTCAGTTGCATGCAGGTGTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAG
CGAAATTGAGTACCTATTGAAAAATGGATGGGTTCCTTGCTTGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E396902] | SGN-U577358 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T198228 [Download][View] | Facility Assigned ID: FA0AAD32BH04RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |