EST details — SGN-E396975

Search information 
Request: 396975Match: SGN-E396975
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184369Clone name: TUS-44-J15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184369 is on microarray TOM1 spot ID 1-1-2.2.16.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74181 [cLER-8-C11] Trace: SGN-T93657 EST: SGN-E279755 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E396975Length: 582 bp (884 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396975 [] (trimmed) CATGATTAACAAAATGATATTATTCTCTTTCTTTCTAGGGAAAAGTGCATCTAAAACATACTTATTTGAATAAATCCATTACAACACTAAAACTC
TACAACCAGGACATTATTTCTGAAAACTTGTTAATTTGCTCATTTCTATTGTCCCCAGTGGCTGTGGAAGGTAAGGCAAAGTCTGAACAAACAAT
TCTTGTGCTACAGAACACATGGTTGGTCGCAATTCAGGCGTGGTACGTGTACATGCCAAGGCAATCGTGATCACAAAAACCACTGCCTCTGCCAA
GTGGCCGGGGGGAGGACGAAATCTTTGGTCAAAAACATCCTTCAAAAGTATTTCCGGACACAATGTTGTTGATGCTGATAATGAAGTTAAAACCT
CCCCTGGATGCCTTCCCATCATATTCTCCATCGCTACAACTCCAAAACTATAGACATCACACTTTTCTGTAACACGCATGGTAAGTGCAAGCTCT
GGAGCCATATAGCCATAACAACCAACAACTGTGGTCCAATTTGATGATTCGGAAGCTAACAACTTTGCTGTGCCAAATTCATATAGTCATGCCCC
GAATTCGGATTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396975] SGN-U564935 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198301 [Download][View] Facility Assigned ID: FA0AAD32CE08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0278 Quality Trim Threshold: 12.5