EST details — SGN-E397065

Search information 
Request: 397065Match: SGN-E397065
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184310Clone name: TUS-44-H4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184310 is on microarray TOM1 spot ID 1-1-5.4.16.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79374 [cLES-8-L2] Trace: SGN-T99189 EST: SGN-E288669 Direction: 5' Facility: TIGR
Clone: SGN-C184310 [TUS-44-H4] Trace: SGN-T198392 EST: SGN-E397066 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397065Length: 437 bp (868 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397065 [] (trimmed) GAAAAAAACTTGGGTTTTTTTATTTTGGAATAATTATAGGGGAAATATGCTGAAAAAAAAGCTTAAAAAAAAAAAAAAATAAAATGGGTTAAATA
TCATCTACAGCTATCCCTCTCCTCTTAAGTTTTCAAACACAAAAAGCACATTTAAAAAAAAGCTTGGGTGCTTTTGCCCTATCTGGAATTTCAAA
AACAATTTTTACAGCCCCTTCATTTCAAATAAAATCCCATACCCCATCTGTTGCCCGCACAAAAAATTGGGCTTTGCTTGGGAAATGCCTTTGGG
TCACGTCAGGGACTGAAATTAAACCAAAATTTTTTACGCCATAATCCCCCAAGGGTCTAAAAATTGGCAATCCAGGGGAGGATTCCTCGGGGAAC
CATAATCGGGGCACCCCCAAATTATCCTCCTAGCCAAATACTTTAACGTTTAACTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397065] SGN-U598731 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198391 [Download][View] Facility Assigned ID: FA0AAD32DD02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.893 Expected Error Rate: 0.0327 Quality Trim Threshold: 12.5