EST details — SGN-E397085

Search information 
Request: 397085Match: SGN-E397085
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184368Clone name: TUS-44-J14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184368 is on microarray TOM1 spot ID 1-1-3.2.16.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75625 [cLES-14-N16] Trace: SGN-T100601 EST: SGN-E286780 Direction: 5' Facility: TIGR
Clone: SGN-C184368 [TUS-44-J14] Trace: SGN-T198410 EST: SGN-E397084 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E397085Length: 564 bp (864 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397085 [] (trimmed) TTTTTTTCCTCTATTCTCTTTCTCTCTTTACTTTTTCTTCTTTGTGTACCAGAAAGAAAATAAAAATAAAAATGAACAGAGAGCATTGAACAAAC
ACTCTATCAAAAAGCCATAGCTATGGAGTTTCAGGACCACTTTTCTCAGGAAATGGTTCTTCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAAA
ACGCGGTATTGCGTTCCATGCTACCTGAATCTCCTCATCACGACGCTCGAAAATCACCTCCGACTTGGCTCAATACTTCTCTCCTTCGTCAACAA
CACAGTCAGTTTGGTAACGCATCCTCACCTTCCTCGGCTGCAGCTGCAGCTGCCGTAGCCGGAGGGAATAATTTCCTTCATCTCCAGACATCTAA
CTCCGACTCGTCAAACTCTAACCAGTGGCTCTCACCTACTGCGGCGGCTGGAGGTGGAGGTAACGGCGGTGGAGGTGGGCATAATGATGAGTTAT
CAGAGTCGATGAATTTTGCGAAGAAGATGAGTCAACAGCATAGTGGAGGAGGAGAAGAAAACAATAATAATAATAATAATAATAATAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397085] SGN-U571928 Tomato 200607 Build 2 98 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198411 [Download][View] Facility Assigned ID: FA0AAD32DE07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0087 Quality Trim Threshold: 14.5