EST details — SGN-E397182

Search information 
Request: 397182Match: SGN-E397182
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184817Clone name: TUS-45-M7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184817 is on microarray TOM1 spot ID 1-1-2.1.14.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81098 [cLET-14-I1] Trace: SGN-T106066 EST: SGN-E294223 Direction: 5' Facility: TIGR
Clone: SGN-C184817 [TUS-45-M7] Trace: SGN-T198509 EST: SGN-E397183 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397182Length: 510 bp (874 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397182 [] (trimmed) AGCAAGTCTATGAGTATCTTATTTAATTGTAGTCTTTAGATTAAACATAAACTGGTAGAAGCAACACAACAACCAATTACGGTTAACCCTAGAAC
TCGACCCGACACGACCCGACCAAAGCAGTAGAGATAGTTTGAAATTAAAAACAAAGCCTAAAACGGCGACTCAAATACATAAAAGACTGATAAAA
CTAGATCATCATCATCATCAGATCTAGAGTTGACCGCAGTCAGCAATAACCACAGGCTTGGAGCACCTTCCAGAGCTAGATCCAACAGCCTCTGC
CTTCTTAATCACATCCATGCCTTCAACAACTTGTCCAAACACGACGTGCTTTCCGTTGAGCCACTCAGTCTTAGCGGTACAGATGAAAAACTGAG
AACCGTTGGTTCCAGGTCCAGCATTAGCCATGGAGAGGATTCCAGGGCCGGTGTGCTTCTTAACGAAGTTCTCATCGTTGAATTTGGCTCCATAG
ATCGACTCTCCTCCGGTCCCGTTTCCGGCGGAGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397182] SGN-U577630 Tomato 200607 Build 2 444 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198508 [Download][View] Facility Assigned ID: FA0AAD33AG04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0056 Quality Trim Threshold: 14.5