EST details — SGN-E397225

Search information 
Request: 397225Match: SGN-E397225
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184589Clone name: TUS-45-C19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184589 is on microarray TOM1 spot ID 1-1-6.3.14.15 [Order] [Tomato Microarray Database]
See unigene SGN-U579080 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C87784 [cLET-5-M7] Trace: SGN-T103485 EST: SGN-E290037 Direction: 5' Facility: TIGR
Clone: SGN-C184589 [TUS-45-C19] Trace: SGN-T198463 EST: SGN-E397137 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397225Length: 424 bp (867 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397225 [] (trimmed) CTAAAAATTAGGAATGTATAGAACAAAATATAAAATCTTAAAAGCTAGTCTTTCTTAGGTTCACATAGCAGTTACTTCCAAAAGTTAAAACATAA
ATCAAAATTATCCCATTACATCATTTAACTGAAGGGAGATGCAAATCAAAAAGCTCTAATGCCATATGTCTTCTACCAGCACCAAATGTAGAGGT
CCTCGTAAAAACTCGTATTCAAGATTTTTAACGGTACTTGATGAAGCCAATTTCCTTGGCATTGCTGCGGAAGCACTGTCTGCAACACATGAGTC
CATACTTTCTAATAATTGCATGAGGATTACCACACACACGGCATGTGCGAGAGCCAGGGCCGTAGTTCTTTGGGTGAGCGTTCCAGATGTTAGAG
TGACCCATCTTCACAGAAAAGCGAGGCTGCGCGATGTGTTTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397225] SGN-U579080 Tomato 200607 Build 2 130 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198551 [Download][View] Facility Assigned ID: FA0AAD33AB10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0006 Quality Trim Threshold: 12.5