Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E397259

Search information 
Request: 397259Match: SGN-E397259
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184811Clone name: TUS-45-M1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184811 is on microarray TOM1 spot ID 1-1-8.1.14.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397259Length: 515 bp (861 bp untrimmed)
Status: Current VersionDirection: 3'
>SGN-E397259 [] (trimmed) GACAATCTACAAACTGAATAAATCAACACATAACAACCACACGGCCTGAGTAAAGAATTTAAATATTACAGAGGGTTGGGGGAGAGGAACATAGC
ATAATCTCTTTTCTGGAAACATTCTAATAATTTATGCAGGATTGTCCGAGACTTTATGCATTCTGTCAGTCTATAGAAGTGCCTCATCTAACAAA
TACCCCTCTAATAAATATATATACTGCACACTGCGATAAATTCCCATGGATCAAAATTACCCCTTAAATCGGACAACAATGCATGAGATATCATC
TTTGCTTTCTCTGACCAATGCTTCGATCGCTAATTGCTTGGCTGCCTTCTCTGGATTTTTGACCTTCCTCACAATGTCAACTGCCTCTTGATTAG
ACATTACCTTCCATAAACCATCACTTGCAAGTATGAAAAGATCTGTTTCCGCATCAACATCAGCATTTGTTACGTCAGGATCACAACTCAAATGT
GATTTCAAGTTTTTGTCCCCAAAAGCTCGAGAAACACCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397259] SGN-U580176 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198585 [Download][View] Facility Assigned ID: FA0AAD33AG01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0112 Quality Trim Threshold: 14.5