EST details — SGN-E397292

Search information 
Request: 397292Match: SGN-E397292
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184674Clone name: TUS-45-G8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184674 is on microarray TOM1 spot ID 1-1-1.3.14.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83426 [cLET-24-K19] Trace: SGN-T108601 EST: SGN-E296084 Direction: 5' Facility: TIGR
Clone: SGN-C184674 [TUS-45-G8] Trace: SGN-T196550 EST: SGN-E395224 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397292Length: 399 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397292 [] (trimmed) CCTTCACTGGACTCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGT
TGCATGCAGGTGTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGA
GTACCTATTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACG
ATGGCAGATACTGGACCATGTGGAAGTTGCCCATGTTCGGGTGCACTGATGCAACCCATGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTAC
CCACAGGCATGGGTCCGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397292] SGN-U580869 Tomato 200607 Build 2 1124 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198618 [Download][View] Facility Assigned ID: FA0AAD33BD04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.992 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5