EST details — SGN-E397377

Search information 
Request: 397377Match: SGN-E397377
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184713Clone name: TUS-45-H23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184713 is on microarray TOM1 spot ID 1-1-2.4.14.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81331 [cLET-15-L5] Trace: SGN-T106419 EST: SGN-E293468 Direction: 5' Facility: TIGR
Clone: SGN-C81331 [cLET-15-L5] Trace: SGN-T106420 EST: SGN-E293469 Direction: 3' Facility: TIGR
Clone: SGN-C184713 [TUS-45-H23] Trace: SGN-T198702 EST: SGN-E397376 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397377Length: 341 bp (840 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397377 [] (trimmed) TCTCTCTTCACTTTTCTCAGTATCACTTCTCAACAGAAATGGCGGTCTCGAAGGCAACTTCATCAGTCCTTGCTGTAATTGTCGTTGTTTGTTTT
CTCATCGGAACTACAATAGCTGCCGACGCACCTGCACCGGCACCTGCTTCTTCCGCCGGATCTATGTCTCCGTCATTCGCCGCTGGCTGTGCTGT
CACTGTTTTCGCTTTCCTCTTCGGATCTGCACTCAGGATCTGAAGTTTTTGAAGAGTAGAGAGTGAGATGAGTTTGTCTCAATTTTCTACTGCTT
ATTCATTGTTTGCATTTCAGATTTCTTCTTGTTTTCCGGTGTATATGAGCTATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397377] SGN-U577577 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198703 [Download][View] Facility Assigned ID: FA0AAD33CD12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0004 Quality Trim Threshold: 14.5