EST details — SGN-E397379

Search information 
Request: 397379Match: SGN-E397379
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184739Clone name: TUS-45-J1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184739 is on microarray TOM1 spot ID 1-1-8.2.14.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81361 [cLET-15-P19] Trace: SGN-T106546 EST: SGN-E293595 Direction: 5' Facility: TIGR
Clone: SGN-C81361 [cLET-15-P19] Trace: SGN-T106547 EST: SGN-E293596 Direction: 3' Facility: TIGR
Clone: SGN-C184739 [TUS-45-J1] Trace: SGN-T198704 EST: SGN-E397378 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397379Length: 475 bp (846 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397379 [] (trimmed) GTAATCTTGACATTCCTTTATTCTAGACAGAAATGGCAAAGCGAAGGTTTTCTTTGACCTTACCATCAGTGGTGCACCAGCTGGTCCTGTGGAGA
TGGAACTCTTCTCCGATACCACTCCCAAAACGGCTGAAAACTTCCGAGCTCTTTGTACCGGTGATAAAGGTGTTGGAAAGATGGGGAAGCCTTTG
CACTACAAGGGCTCAACCTTCCACCGTGTGATCCCATGGTTCATGTGTCAAGGATGTGATTTCACCGCCGGAAACGGGACCGGAGGAGAGTCGAT
CTATGGAGCCAAATTCAACGATTATATTTTCATTAAGAAACACACCGGCCCTGGAATCCTCTCCATGGCTAATGCTGGACCTGGAACCAACGGTT
CTCAGTTTTTCATCTGTACCGCTAAGACTGAGTGGCTCAACGGAAAGCACGTCGTGTTTGGACAAGTTGTTGAAGGCATGGATGTGATTAAGAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397379] SGN-U577630 Tomato 200607 Build 2 444 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198705 [Download][View] Facility Assigned ID: FA0AAD33CE01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0216 Quality Trim Threshold: 14.5