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EST details — SGN-E397458

Search information 
Request: 397458Match: SGN-E397458
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184608Clone name: TUS-45-D14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184608 is on microarray TOM1 spot ID 1-1-3.4.14.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C140651 [cTOF-12-P19] Trace: SGN-T155846 EST: SGN-E343889 Direction: 5' Facility: TIGR
Clone: SGN-C184608 [TUS-45-D14] Trace: SGN-T198785 EST: SGN-E397459 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397458Length: 609 bp (888 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397458 [] (trimmed) CATATGAACATCCCGAGAGCACGAACAAATATATATCACTGAATATCATTGTCCTGAAACATATTTCAAAATCACTCTGGGTAGCCAAAGCTGAC
ACTCAATTTTCAAATATAGTTAATAGTTTTAAAGGCATATGCACTTCTTATCGGACGCCTGAGCATTTTGCAAAATTACAGCTACAATAAAATCA
AAATACAACAAGAGGAACACAATAAACCCCAAATGTATGTGCGTCCATGCTGGAAATGTAGTATATGGTCTTAACACCAAATTAAAGTTCATCCT
GCAAAACCAAAAAAAAAACTAATGTCACCAAAGGTGCAAGGCACAATGATTCATCTACCAAACCTTAATTCTGTTCATCATTTGTTTCAGTAACC
TCTGATTTTATAAGTAAATGATATTAACATTATAAGTTTTACTGGATATGGCTGCAATTTACAACATTACTGTAAATCTGCCGTTTGTACTTTTG
AAATAACTAACCAAAAATCTATCCGTTTAAAAGGATCAACCTTTCAAACATAACCCATAAATAGAAGGGAATTCATCAAAGTTTAAAACCCCTTT
TCTTCTTAAAAAAAAAAATTTCAAGATCAATATTTTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397458] SGN-U595377 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198784 [Download][View] Facility Assigned ID: FA0AAD33DB07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.932 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5