EST details — SGN-E397530

Search information 
Request: 397530Match: SGN-E397530
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184840Clone name: TUS-45-N6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184840 is on microarray TOM1 spot ID 1-1-3.2.14.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E397530Length: 638 bp (869 bp untrimmed)
Status: Current VersionDirection: 3'
>SGN-E397530 [] (trimmed) ACTTGTTTCATAACTTAAGAGGGTAGCTAAAATAGTGAAATTTTACAAACAGTACATGGAATGTAATGAACATGGTCATGTCCACTACACAAACT
TACAACACCAAAAAACTAAAACCATCTTATTCCTACTATCATTTTTCACTGTTCCCTCCCATATAAATACACAAAGGAAGGGGGGGAAAAGTGAT
AATGAGTACAACCACATAACAAAAAGCAGGATTGTTTTAATGGAGCTTGTTGGCAAGATTACACTGCTTTCTGATCTCACCTTTTGTCCCAGTAA
GTGGATTATTCTCAAAAAGAATAGTGATGGCTCTTGCAAATTCCTTGAAAAAATAATTTTGGCTTTTTGCCATTTTCTTTACATATGGCTTAGTC
CTCTTGTCCATTGCTAGTTGATGATCAACTAACATTAACCCCTTATTGTCCAATATGTTCCTGTAATAGTTGTTGTCTAGAACCATGGGCGTGCC
TCTGTCATTTCTCACATATTGCACAGCCTTTGGGTCTGGAATTGGATCACGACACTTCATGACCATGTGTGGTACATGCTCTGGGTTCAATTGAG
GGTCTACTTCTGGATAATAAACGGTGTACCAACTTCACACAGTGTGTTCAACCCCCACTGTGTGAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397530] SGN-U577555 Tomato 200607 Build 2 210 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198856 [Download][View] Facility Assigned ID: FA0AAD33DG03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0098 Quality Trim Threshold: 14.5