EST details — SGN-E397565

Search information 
Request: 397565Match: SGN-E397565
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184965Clone name: TUS-46-C11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184965 is on microarray TOM1 spot ID 1-1-6.3.12.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1813 [cLEC-13-P24] Trace: SGN-T26053 EST: SGN-E204300 Direction: 5' Facility: TIGR
Clone: SGN-C184965 [TUS-46-C11] Trace: SGN-T198890 EST: SGN-E397564 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E397565Length: 225 bp (865 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397565 [] (trimmed) ATTCTATGACTGTGGTTCCTGGCAAGACTTATAGGCTTAGAATTGGCAGCTTGACTGCTCTTTCAGCTCTAAGTTTTGAAATTGAGGGGCATAAC
ATGACAGTTGTTGAGGCAGACGGTCACTATGTGGAGCCATTTGTGGTAAAAAATCTGTTCATTTATTCTGGAGAAACATACTCAGTCCTAATTAT
AGCTGATCAAGACCCTACAAGAAATTATTGGGCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397565] SGN-U581990 Tomato 200607 Build 2 45 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198891 [Download][View] Facility Assigned ID: FA0AAD34AB06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.931 Expected Error Rate: 0.0114 Quality Trim Threshold: 14.5