EST details — SGN-E397590

Search information 
Request: 397590Match: SGN-E397590
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185053Clone name: TUS-46-G3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185053 is on microarray TOM1 spot ID 1-1-6.3.12.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3459 [cLEC-20-K24] Trace: SGN-T27770 EST: SGN-E205988 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E397590Length: 533 bp (867 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E397590 [] (trimmed) AGGTGTGCTGGAAAGTGGAGGAGAATGCCCTTCTTGATGAAGTGATCATTATGTTCAAGAAACAAGTTGCTTCATGGTCTGGAAGATGAGTTTGA
TAATCTATCATTTATTAATAATAATTGATAATAAAATCAGGATTCTGTAAATTATAAATATACCTAATTAATATAAAATCAGTATGAATACAACT
GAAAAGGAATACAGGACAATCAATGGATTCACGAGGCCTAAACATCCCTTTTAGATATTCACCATAGTCTTTTTTATTGAAATAATGTGTTGTGT
ATCGATAGCTATAGTACCAATAACCAATTTGTTGGTTTAAGTATAAATAAGCAATAAATAGATTATTTTAGCATGTTTTTTTTACTTTTTCTCAA
TAATGATATTTTACTATGCCTTCAAGACATCCTACATTGATCCTACTGATGATTACATAATAAAATCAAGGAGAGGACAAAGCTTGTATTTCTTA
TATAATTTAATCAATAGTGAAAATGAAATAGAACTTTATGATTTCTTTTGTTCCTATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397590] SGN-U602915 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198916 [Download][View] Facility Assigned ID: FA0AAD34AD02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.924 Expected Error Rate: 0.0030 Quality Trim Threshold: 20.5