EST details — SGN-E397742
Search information |
Request: 397742 | Match: SGN-E397742 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C185285 | Clone name: TUS-46-P19 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185285 is on microarray TOM1 spot ID 1-1-6.4.11.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185285 [TUS-46-P19] | Trace: SGN-T199069 | EST: SGN-E397743 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E397742 | Length: 741 bp (846 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E397742 [] (trimmed)
GATTGGGTACCCGGCCCCCCCTCGAGACTAGTTCTCTCCTGGTCCTGAGATCTGGAAAGGCTCAAACGGGAAAGTGGATGCTCTAGTCTCTGGAA
TTGGAACAGGAGGCACAATAACAGGTTCAGGCAAGTATTTGAGAGAGCAGAACCCCAACATCAAGCTGTATGGCGTGGAACCAGTTGAAAGTGCT
ATCCTTTCTGGTGGAAAGCCTGGTCCACATAAGATTCAGGGGATTGGTGCTGGTTTCGTTCCTGGTGTTTTGGAAGTTAACCTTATTGACGATGT
AGTTCAGGTTTCAAGTGATGAATCCATAGAAATGGCTAAGCTTCTGGCATTGAAGGAAGGATTGCTAGTGGGAATATCATCTGGTGCTGCTGCTG
CTGCGGCAATTAAAGTTGCTAAGCGTCCTGAAAATGCTGGGAAGCTCATTGTTGTTGTTTTCCCAAGCTTCGGGGAGCGATATCTTTCCTCTGTG
CTCTTCGAAACTGTCAGACGAGAAGCAGAGAACATGACTGTGGAGCCTTGAACTTTTTGTCCTTCGATTACTACATCATCGTCGCGAATAGGGCT
TCTGATGAAGCAGAATGTTCTTGTCTAAACCTTCCCCTTTCCATTTTGCTGAAACTGCTAGAAAATAAGGCCATCTCTTTCCTTTATTGGCTATG
TTCTTTAAAGTAAAAAAAAAAAACCGTTCAAGTATCTTTTAGTGCTTTTGTAATTCTACTGTTTCTACAACATTTG
TTGGAACAGGAGGCACAATAACAGGTTCAGGCAAGTATTTGAGAGAGCAGAACCCCAACATCAAGCTGTATGGCGTGGAACCAGTTGAAAGTGCT
ATCCTTTCTGGTGGAAAGCCTGGTCCACATAAGATTCAGGGGATTGGTGCTGGTTTCGTTCCTGGTGTTTTGGAAGTTAACCTTATTGACGATGT
AGTTCAGGTTTCAAGTGATGAATCCATAGAAATGGCTAAGCTTCTGGCATTGAAGGAAGGATTGCTAGTGGGAATATCATCTGGTGCTGCTGCTG
CTGCGGCAATTAAAGTTGCTAAGCGTCCTGAAAATGCTGGGAAGCTCATTGTTGTTGTTTTCCCAAGCTTCGGGGAGCGATATCTTTCCTCTGTG
CTCTTCGAAACTGTCAGACGAGAAGCAGAGAACATGACTGTGGAGCCTTGAACTTTTTGTCCTTCGATTACTACATCATCGTCGCGAATAGGGCT
TCTGATGAAGCAGAATGTTCTTGTCTAAACCTTCCCCTTTCCATTTTGCTGAAACTGCTAGAAAATAAGGCCATCTCTTTCCTTTATTGGCTATG
TTCTTTAAAGTAAAAAAAAAAAACCGTTCAAGTATCTTTTAGTGCTTTTGTAATTCTACTGTTTCTACAACATTTG
Unigenes |
Current Unigene builds | |||||
[SGN-E397742] | SGN-U585413 | Tomato 200607 | Build 2 | 74 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T199068 [Download][View] | Facility Assigned ID: FA0AAD34CH10FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 12.5 |