EST details — SGN-E397764

Search information 
Request: 397764Match: SGN-E397764
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185037Clone name: TUS-46-F11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185037 is on microarray TOM1 spot ID 1-1-6.2.12.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72230 [cLER-1-I6] Trace: SGN-T92111 EST: SGN-E280557 Direction: 5' Facility: TIGR
Clone: SGN-C185037 [TUS-46-F11] Trace: SGN-T1861 EST: SGN-E378470 Direction: 5' Facility: Giov. Lab
Clone: SGN-C185037 [TUS-46-F11] Trace: SGN-T199029 EST: SGN-E397703 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397764Length: 545 bp (876 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397764 [] (trimmed) CTCAACCCATCTTTTATAAATATAAGTTGAACAGACATGCTGTACCCCCTTTCTCCACAATATACATAGCATTTCCCCTCTTATTTTAATGTTAC
TTCTTACTGTTTTGGAGGGACATACACTACAGTACAACATAGGTAACAAGCCACATGATGAAAGAAAAATACCACGCATCAACCCAATTCCAGCC
ATGATTCACAAGCCAACATATCAAAAGCGAACGATCTTCCAGTGTTGGTTCCTGTTGTCTCCTTTCCACCATTCCCAAAGACAAACAGTGGTCCC
ATCGCGGACACCTCCATGCTCTTTATCAGCATTCCATGCATCTAGATTGAGGTTAATGTTATTGACCATCCTAACTGCTCGATAACCATCACCCA
CATCCCTGCTCTCTGTCCATAAAATTGATGCATCAAAAACGTCGGGATTGTATGGGGTGAACTGCACAGGGTGAGAGGCGCCAATAAAGTGCTTC
ACTGCCAGTCCTGAAGCTTTATTAACCAAATCAAAGCTAGAAAAACCCTCTTCATCCTTACCTTTAGGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397764] SGN-U578702 Tomato 200607 Build 2 75 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199090 [Download][View] Facility Assigned ID: FA0AAD34CC06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0125 Quality Trim Threshold: 14.5