EST details — SGN-E397814

Search information 
Request: 397814Match: SGN-E397814
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180353Clone name: TUS-34-C7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180353 is on microarray TOM1 spot ID 1-1-2.3.19.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C25470 [cLEF-12-J19] Trace: SGN-T59474 EST: SGN-E243277 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E397814Length: 571 bp (880 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397814 [] (trimmed) GTCATTTCATCCCGGGAAATCCTACAACAATAACTATAACTCAGTTCCAAATAAGTAAAATTTCATTTTCACCTTATTTACTAAATTCAGGATAA
GGATTAAACAAACCTTTAAGTAATAAAGCAAGATTGCCACTCTTTGGAAATTCATCATCACAAGTCTCAAAAACAACAAGGCTATTTGCAAAAAA
AGGAGGGTTGGACGGGTTCCCTTTGTATAAACAAAACAAAACCGATCAGTCGTCTAATTTTTCAGCATCACTCCACCAAAAGCTAACTGAAAAGC
TTGTCGGGAGAAAGCGGACGTAGTGCCACCATTTAGGGGGGATGTAAAGCATTTCACCTTCCTCTAAAATACAGTCCTGGAATTCGAGGTCTAAA
ATATTTGGGAACTCTTTCTCGTCAATGTTGTCTAAATCAACCTGGGGGGAATTACTAACCATGGTTTCACTATGTGGGTGAACCTCATCCGAAAG
TGATGCAAAGTAAAGCCGAACATACTTTTTGCCAACAACCTGAGCAAGTATGTTATGGTGCGGATCATGAAGCAAAGGCGTCCCATTCCCGGCTG
G
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397814] SGN-U576054 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199140 [Download][View] Facility Assigned ID: FA0AAD22AB04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0164 Quality Trim Threshold: 14.5