EST details — SGN-E397841

Search information 
Request: 397841Match: SGN-E397841
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180451Clone name: TUS-34-G9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180451 is on microarray TOM1 spot ID 1-1-8.3.19.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26545 [cLEF-40-M13] Trace: SGN-T59950 EST: SGN-E246098 Direction: 5' Facility: TIGR
Clone: SGN-C180451 [TUS-34-G9] Trace: SGN-T193482 EST: SGN-E392156 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397841Length: 549 bp (883 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397841 [] (trimmed) AAATCAACAAATATTGCATTAATACAAGTTTAAATAGTCACCCGTCTAATAAAGTTTTGACATAAATGGCCTGGTACAAATTTATTTTTTGGTTC
TTTAACTTACTGATCACAATGTTTACTGATCTTTAACTTACTTTTACTGGCATATTATTAACCACTTCCCAACTAAAATATCCCAACCAACTCCC
ACTCCTACGCGCCACCGTCAACAGTGGCCTTGTCGCCGGTTGAAACGTCGGCTCTCATTTTAAGCCACTCAACGACATCTCCGAACACTTGCTCC
ACATTCTCCTCCAGTTCTCCAACCAGCTGGTGCCACATACCTGGATATATCTTCATTGTTTTGTCCTTGCTTGTCGATCGGCGATATAGCTCCTC
CGCGCACGCGGGATCGCAAATGACATCATCGCTGCCGTGGACGATCAAAAATGGTACTTTCACTTCTTCGAATCTCCCTTGCAGCTCCCTACATA
CTCTCATTAACTCACGCGCCGTCGCGGGGCGTGGTTTTAAAAGTGTTCTCCTTGGACTTGCTATTGCCAATTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397841] SGN-U566786 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199167 [Download][View] Facility Assigned ID: FA0AAD22AD05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0086 Quality Trim Threshold: 14.5