EST details — SGN-E397902
Search information |
Request: 397902 | Match: SGN-E397902 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180752 | Clone name: TUS-35-C22 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180752 is on microarray TOM1 spot ID 1-1-3.3.17.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180752 [TUS-35-C22] | Trace: SGN-T199188 | EST: SGN-E397862 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E397902 | Length: 320 bp (845 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E397902 [] (trimmed)
ACGGAAAGTTCCCCCAAAGGAGTTGAAATAAAGTGAAAATACAACAACTACAAAAAATAATTATATTGAATGTTACTACAACCTAATATTTATGA
TATACTTTTATATCAATACAACAACATTTCTTCTTCCTTTTTTTCTTCTAAGGGAAATTGCTAAATATATAAAAAAAAAAATCTTCATTTCAGGC
TTTATCTTTGAAAAAAGGCAGTTTTTGTAGGAGGCCCAAAAAATTTTGCATATGCAATAGGTAATGCAATCAACTTCTTTGATTTGCCCACATAT
GCTCCCTTTGGGAAGTTGTTGTACCCATTGGCTTC
TATACTTTTATATCAATACAACAACATTTCTTCTTCCTTTTTTTCTTCTAAGGGAAATTGCTAAATATATAAAAAAAAAAATCTTCATTTCAGGC
TTTATCTTTGAAAAAAGGCAGTTTTTGTAGGAGGCCCAAAAAATTTTGCATATGCAATAGGTAATGCAATCAACTTCTTTGATTTGCCCACATAT
GCTCCCTTTGGGAAGTTGTTGTACCCATTGGCTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E397902] | SGN-U580527 | Tomato 200607 | Build 2 | 240 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T199228 [Download][View] | Facility Assigned ID: FA0AAD23BB11FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.874 | Expected Error Rate: 0.0167 | Quality Trim Threshold: 14.5 |