EST details — SGN-E398119

Search information 
Request: 398119Match: SGN-E398119
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183129Clone name: TUS-41-F23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183129 is on microarray TOM1 spot ID 1-1-2.2.3.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183129 [TUS-41-F23] Trace: SGN-T195625 EST: SGN-E394299 Direction: 3' Facility: INRA
Clone: SGN-C183129 [TUS-41-F23] Trace: SGN-T195625 EST: SGN-E398860 Direction: 3' Facility: INRA
Clone: SGN-C183129 [TUS-41-F23] Trace: SGN-T195626 EST: SGN-E394300 Direction: 5' Facility: INRA
Clone: SGN-C183129 [TUS-41-F23] Trace: SGN-T200435 EST: SGN-E399509 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398119Length: 705 bp (814 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398119 [] (trimmed) CCCCCCTTTTTTTCCGCAATCAATTTCTCCAATGAAACAATTGTAAACTTGTTTAGGTAACAACATAAATAAACAAATTTTTCAGATCAACCCCC
ACACACCAATTTGATCTGAAATAAAAAATTGATTTTCAGGTCAAATGATAATGGCACTTGGTGGTAAAAAAAAAAAAAGATGGTAACTTTCAAGA
AAAAAGAAAATACAAGCACACAAAAAATAAATCTAAACACTTTCTTGACACTTGGTTTAACTAATTATCTGAAGCATCCAGCATGTATGGTTCAC
TTAACCATCCTACCAAAGCAGAAGAAATGCATCCCACACAGCAGCGGTTGCGAAAAGAGCTGGTATCATTATCTGTGCTTTAAATGAGTTGAGCA
AATTTGTTGAACTGCTGCGTACTGGAGCAGCTTTTGAAGGTGGAGGTGCCTTTTCAACATGAATAGCCACTTTCATGCCTCCATAACAGTATCCT
TTTCCACTACCGAAATAGTAGGTTTTAGTCACATTAAGCGGAACAAACGTCCCTTCCTGCTCCAGTAGTCCAATTGTGGAGAGGATGATCAGTAT
TGCAGCTCTCGTAGTCTGTCTTGTTTACCTCAAGCACATTCATCTGGTTCCTGTCATACACCAAAAAACTGGGAATGGAAAAGGAAGAGTTACTA
AACACCCACAAATAACTGAAAATATCTCAATATTTTACAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398119] SGN-U586153 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199445 [Download][View] Facility Assigned ID: FA0AAD29CC12FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.945 Expected Error Rate: 0.0028 Quality Trim Threshold: 20.5