EST details — SGN-E398123

Search information 
Request: 398123Match: SGN-E398123
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172634Clone name: TUS-14-A16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172634 is on microarray TOM1 spot ID 1-1-1.1.20.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172634 [TUS-14-A16] Trace: SGN-T195360 EST: SGN-E394034 Direction: 3' Facility: INRA
Clone: SGN-C172634 [TUS-14-A16] Trace: SGN-T195360 EST: SGN-E399014 Direction: 3' Facility: INRA
Clone: SGN-C172634 [TUS-14-A16] Trace: SGN-T199595 EST: SGN-E398269 Direction: 5' Facility: INRA
Clone: SGN-C172634 [TUS-14-A16] Trace: SGN-T200201 EST: SGN-E399015 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398123Length: 463 bp (845 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398123 [] (trimmed) AAAACACACAAAAAGAATCTTATCAACTTGTATAGTAATCTAGTTTTCCTGATTACTAGTTAAGCAAAAAAATTAATTTAAGAAAAAAATTTCTT
TCTTGAAAGGAAAATATGCGCGCAGCAGTTTAATTGACAAGCTATCAATCAGTTTGCTGGAAAACTCGAATTCGTCACTTTATTGTTGCTGCCAT
TGTTGTTGTTATTGCCATTGCTTGTGACACTGTTGTTATTGTTGTTGGCTGGCGTTGTGGTGGTGGCGATGGTGTTGTTGGTACCATTGTTTGGT
TGCCCCGGATTGCCAATAAGTGAAGTGATGGCTGCTGCTAATGCTGCGGTGAAATTAGGATCACTGGTTAAGGCGTTCACCGTGTCAGCTACAGG
ATTGTGGTTGGATGGATTAATCGAGGATGGCATCGTTGAAGGGTGTTGTTGTCCTTCTAAATCTTGACATGAGGGGGGGGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398123] SGN-U576773 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199449 [Download][View] Facility Assigned ID: FA0AAD2BA08FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5