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EST details — SGN-E399164

Search information 
Request: 399164Match: SGN-E399164
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183569Clone name: TUS-42-I7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183569 is on microarray TOM1 spot ID 1-1-2.1.2.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69813 [cLER-12-K4] Trace: SGN-T94367 EST: SGN-E283400 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399164Length: 459 bp (944 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E399164 [] (trimmed) CAAAATTTTGATTTTCCTAATAATGTTTCTTGCTATGTTGCTAGTAACAAGTGGGAATAATAATCTAGTACAGACAACATGCAAGAACACACCAA
ATTATAATTTGTGTGTGAAAACTTTGTCTTTAGACAAAAGAAGTGAAAAAGCAGGAGATATTACAACATTAGCATTAATTATGGTTGATGCTATT
AAATCTAAAGCTAATCAAGCTGCTAATACTATTTCAAAACTTAGGCATTCTAATCCTCCTCAAGCTTGGAAAGATCCTTTGAAGAATTGTGCCTT
TTCGTATAAGGTAATTTTAACAGCAAGTATGCCAGAAGCAATAGAAGCATTAACAAAAGGTGATCCAAAATTTGCAGAAGATGGAATGGTTGGTT
CTTCTGGTGATGCACAAGAATGTGAAGAATATTTTAAAGCTACAACTATTAAATAATCGGCGGGTTCTAAATTACATAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399164] SGN-U579697 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200245 [Download][View] Facility Assigned ID: FA0AAD30AE04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5