EST details — SGN-E399195

Search information 
Request: 399195Match: SGN-E399195
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183707Clone name: TUS-42-O1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183707 is on microarray TOM1 spot ID 1-1-8.3.1.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70912 [cLER-16-E4] Trace: SGN-T95487 EST: SGN-E284214 Direction: 5' Facility: TIGR
Clone: SGN-C183707 [TUS-42-O1] Trace: SGN-T196122 EST: SGN-E394796 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E399195Length: 596 bp (902 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E399195 [] (trimmed) AAAATCATAACTAAACTGATATAAAGTTTTCAACTCAGTATCCAAGGAGCACAACTAACCAAAAAATGCAATATTATCTATAACGCGTACAAGTC
AAAACGCCTGAAACTGCAAAGATTGTAATACAATGTCCTTAAAAGATGCGTTGAGTCTTTCCCATGGTACTCTTCAAGTACAAGCATCTCACATT
TTGCCAATTCTTCTTTAGCAAGGACACGAAAAAGTTGACACTCATCTGCACGTTCTGGAAGATTTGTTTCTCCTCCATATCCATATTACCTACGG
CAACTCCCATGCAAAGAACCTTCTTCAACTGGAATTTGATAGTCGCCTTGGTCTCGTTTACCTTAAACTCGAGTGATTCCTGGTGGGAAACAAGG
GTAGGAAACTTACCTGCCTTGTTCAAACCAGGCCCCAAGAGACGGGGGATCTGCTTGATAACAGCTTCTGATGCCAAGAAAGCATGGTACTTCTT
TGCGAGCTTCTTAACCAACTTCTTGTTTTTATTAAGCTTCTTCAGACCTTCCACATCCCTGTACTCCAAACCAATCTTTTCTGCCTCTCCCCAGT
GCTGACCATCTCCAGCATGCAAATCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399195] SGN-U578592 Tomato 200607 Build 2 55 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200257 [Download][View] Facility Assigned ID: FA0AAD30AH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0138 Quality Trim Threshold: 14.5