EST details — SGN-E399337

Search information 
Request: 399337Match: SGN-E399337
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183407Clone name: TUS-42-B13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183407 is on microarray TOM1 spot ID 1-1-4.2.1.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C68450 [cLEN-6-G1] Trace: SGN-T88300 EST: SGN-E273604 Direction: 5' Facility: TIGR
Clone: SGN-C183407 [TUS-42-B13] Trace: SGN-T196064 EST: SGN-E394738 Direction: 3' Facility: INRA
Clone: SGN-C183407 [TUS-42-B13] Trace: SGN-T200338 EST: SGN-E399338 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E399337Length: 420 bp (965 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E399337 [] (trimmed) ACTCATTATTACGGTGAATCCTCTTAAAGAGTATAATCATCCTCTTCAAAACACAAACAAATTAAACATTAGCGCTCAACATCAACAATCCAAAA
ATAAGATGTACACTACTTGAAAAAAAAAAACAAGACGAATTTCCAACGAAACCCATTGGAAATATTTTCTCAAAAAAACAAAAACAAATTAAACA
TGAATTGCCAACTGCAACAATTCAAACATAAAATGCATACTACTTAAAAAAACAAGATGAAACTCATTAGAAAAGTTGCTTGTTGAAGCGGAAAT
TCAACAATTAGCATATCAAACACCACAATAAATCTTGAAAAGATCACTTGGAGGAGCTGTATAGCCAGCTTCTGTGGTACCATACTTGAATAATT
CAAGAATTTCAAATGGCTTGAAGAGTAATGGGGGTTCTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399337] SGN-U579305 Tomato 200607 Build 2 261 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196064 [Download][View] Facility Assigned ID: FA0AAD30CA07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.906 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5