EST details — SGN-E414788
Search information |
Request: 414788 | Match: SGN-E414788 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C269666 | Clone name: STM-20-K19 |
| ||
Library Name: STM | Organism: Solanum tuberosum |
Tissue: mixed tissues
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C269666 [STM-20-K19] | Trace: SGN-T266926 | EST: SGN-E414789 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E414788 | Length: 453 bp (986 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E414788 [] (trimmed)
CAAAAATTAAGGTACACCTCTTTAACAAGAAGGTACAACCACCTAAAGCACAATTTCCCTGTTCAACCACCATTCATGGCTTTCAATTCAAGATT
CCATTTGGGGTTTCTTATTTTCTTCATATAAACCCGTTTTACTATCTCTTTCATCCTCAGCCCATCACCACAGCCAGAACCAAAACCCACAGTGT
ATGATATTCTCACAGTATATGGGCTGCCACGTGGCATCTTTCCAGACACTGTGGAATCCTATAATCTTGATAAAGATGGAAACTTTGAAGTATTT
CTGAAAGCCCCTTGTTATGTAGAGTTTGAATATTTGGTTTATTATGCTGAAAAGATTAGTGGGAAACTAGGTATTGGGTCAATTACTGAGTTGGA
AGGGATTGAAGTGAAAAGATTCTTGTTTTGGTTTAATGTTAAAGAAATTAGAGTTGATTTGCCACTTTCTGAT
CCATTTGGGGTTTCTTATTTTCTTCATATAAACCCGTTTTACTATCTCTTTCATCCTCAGCCCATCACCACAGCCAGAACCAAAACCCACAGTGT
ATGATATTCTCACAGTATATGGGCTGCCACGTGGCATCTTTCCAGACACTGTGGAATCCTATAATCTTGATAAAGATGGAAACTTTGAAGTATTT
CTGAAAGCCCCTTGTTATGTAGAGTTTGAATATTTGGTTTATTATGCTGAAAAGATTAGTGGGAAACTAGGTATTGGGTCAATTACTGAGTTGGA
AGGGATTGAAGTGAAAAGATTCTTGTTTTGGTTTAATGTTAAAGAAATTAGAGTTGATTTGCCACTTTCTGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E414788] | SGN-U274764 | Solanum tuberosum | Build 4 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T266925 [Download] [View] | Facility Assigned ID: STMCY70TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.947 | Expected Error Rate: 0.0001 | Quality Trim Threshold: 14.5 |