EST details — SGN-E427306
| Search information |
| Request: 427306 | Match: SGN-E427306 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C277094 | Clone name: STM-48-M23 |
| ||
| Library Name: STM | Organism: Solanum tuberosum |
Tissue: mixed tissues
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C277094 [STM-48-M23] | Trace: SGN-T279442 | EST: SGN-E427305 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E427306 | Length: 941 bp (1111 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E427306 [] (trimmed)
TTTTATCATGACAATTAATTTAGCAGCTTTCAACTGATCTAATCACCAGGCATTTGTACAATTAGAATAGAAGACATCAATTCTACTGACTCCAG
TTAGATAAAAATTTTGGTTGAAGAATGCCGTCATTACAGGGAAAGCAAGGAGGGGGATAATTTAAACCTGAGGTTGTGCCATATGCCTGCCAGCA
AAAAAATGTTGTAGGATCCCCAGAAGATGAAGTAAGTTGAATATCTTCCAAGTACAACTTTCTGCAGGGGAAGCTATCGCTGCAGGCAAGTGTTA
CTGCCCTTTCTGTAGCTGAAGTTCCTTTAATACCCATAAAGGATATGCTGTCAATGCGAATATTTGAAGTCTTGTTTGAACAGGGTTTCGTAGAA
TCACAATAATATTGGTCGATTATGATAGGATTTGAGACGTTTTCCATCCAAACATTCTCAAAAGAAACCTTTTTGACAAACCCAGAACCACCCTG
CCAAGTCTTTATTCTAACCCCGTTCTCAGTGTTGGAAATAGATGCTCCGTTAACATGAACATTGTAAACCTGAGAAAATGAATATGACTTTCCCA
AGCTTCCAATGCTTATACCATGGCCTGGCCCACACACAATGTTTTTGACTTTGAGGTTGTTGCATTTGTGGAAAGTTAAAGCCGTTGGAGCATGA
TGACAAGGATTTGTTCTGTTGACCTTGCATGACCGAGCCCACCACTCCTGGCCCATACCATTTATAATTCCTCCTCCTTCTACTGTCAGGTGTTT
TACTCTAAAGAAATAGAGCCATTTTCGTGGATTCAAGTCATCCCAGACTTCAGGATCCTTTGGTGCTAAAATAGTACCTGCAATCCGTATAGACA
CCTTTGACCGGCAAGGACCAGCAAAATTAATATGTCGAACTAAGAAAGAATAACCAGCAGGGATGACAATCTTTGCATGTGATGGT
TTAGATAAAAATTTTGGTTGAAGAATGCCGTCATTACAGGGAAAGCAAGGAGGGGGATAATTTAAACCTGAGGTTGTGCCATATGCCTGCCAGCA
AAAAAATGTTGTAGGATCCCCAGAAGATGAAGTAAGTTGAATATCTTCCAAGTACAACTTTCTGCAGGGGAAGCTATCGCTGCAGGCAAGTGTTA
CTGCCCTTTCTGTAGCTGAAGTTCCTTTAATACCCATAAAGGATATGCTGTCAATGCGAATATTTGAAGTCTTGTTTGAACAGGGTTTCGTAGAA
TCACAATAATATTGGTCGATTATGATAGGATTTGAGACGTTTTCCATCCAAACATTCTCAAAAGAAACCTTTTTGACAAACCCAGAACCACCCTG
CCAAGTCTTTATTCTAACCCCGTTCTCAGTGTTGGAAATAGATGCTCCGTTAACATGAACATTGTAAACCTGAGAAAATGAATATGACTTTCCCA
AGCTTCCAATGCTTATACCATGGCCTGGCCCACACACAATGTTTTTGACTTTGAGGTTGTTGCATTTGTGGAAAGTTAAAGCCGTTGGAGCATGA
TGACAAGGATTTGTTCTGTTGACCTTGCATGACCGAGCCCACCACTCCTGGCCCATACCATTTATAATTCCTCCTCCTTCTACTGTCAGGTGTTT
TACTCTAAAGAAATAGAGCCATTTTCGTGGATTCAAGTCATCCCAGACTTCAGGATCCTTTGGTGCTAAAATAGTACCTGCAATCCGTATAGACA
CCTTTGACCGGCAAGGACCAGCAAAATTAATATGTCGAACTAAGAAAGAATAACCAGCAGGGATGACAATCTTTGCATGTGATGGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E427306] | SGN-U271923 | Solanum tuberosum | Build 4 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T279443 [Download] [View] | Facility Assigned ID: STMHG84TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0091 | Quality Trim Threshold: 20.5 |
Working
