EST details — SGN-E427525
Search information |
Request: 427525 | Match: SGN-E427525 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C277034 | Clone name: STM-48-J23 |
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Library Name: STM | Organism: Solanum tuberosum |
Tissue: mixed tissues
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C277034 [STM-48-J23] | Trace: SGN-T279661 | EST: SGN-E427524 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E427525 | Length: 949 bp (1156 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E427525 [] (trimmed)
GTAATTATGGGAGTTTTTACAGATCATTTCCTGCACCTAGGAATGACAAGAATTGGATCTTTCTTAGATATTATGAGATCCAAGATCTCATCCAT
GTCAATCTGATCCGGATTCATATCATTTGGCAGAAACCAATCGAACTTATGGACCAAAGAAGCAACAACTAAAGGAACAAACCTCGAAGCCAGAG
GTTCTCCAGCACACATTCTTCTTCCCGAACCAAATGGAATATACTCAAAATCTCGCCCTTTATAGTCCATCTTAGAGTTCATAAATCTTTCGGGT
TTGAAGCTTGAAGGATCATCCCAAACCTTTGGATCCCTCGCAATTGCCCACATATTGACCATCACTTGTGTGTCTTTCGGAATTCTGTAGCCCAT
GACTTCACATGTTTCCACAGCGCGATGAGGGAGTAGCAACGGGCCAGGAGGATGCAACCTTAATGTCTCTTTCAGACAAGCATCCAAGTATGGCA
TGTTCGTCAAGTCAGATTCCCTTATTATAACGTCTTTATCTCCTACTACGTTTGCAATTTCATCGCGGAGTTTTGTTAAGCATTGATGATTTTTC
AAGAGCTCCACAAGCATCCATTCACTTGTAACAATTGTGGTTTCTGTCCCGGCTCCAAATAATTCCTATAAAAAGGAAATGAAAACAATACTACT
TGATTGACCTTTGTACGTACAGTTACTGAAAATATTTTTCAAAAGTTTTAACTAACTGAAGATGAAAAAATTGGAAACATATCGAAGATGACGTA
CCATAAGCAATGCATTGATATGTTTATCAGTGAAACCATTTTTAACCAAAGCATCAACAAAATCTACAGCATCCATAGAAGTTTGACTCTCTCTT
TTTCTTCTCTCCTGAACGACGCCAGCCCAAACAACAGACGTTTTATTGAACAAATCCATGATTTTCTTGTATGTTCTCTGGAAATTCATACTGC
GTCAATCTGATCCGGATTCATATCATTTGGCAGAAACCAATCGAACTTATGGACCAAAGAAGCAACAACTAAAGGAACAAACCTCGAAGCCAGAG
GTTCTCCAGCACACATTCTTCTTCCCGAACCAAATGGAATATACTCAAAATCTCGCCCTTTATAGTCCATCTTAGAGTTCATAAATCTTTCGGGT
TTGAAGCTTGAAGGATCATCCCAAACCTTTGGATCCCTCGCAATTGCCCACATATTGACCATCACTTGTGTGTCTTTCGGAATTCTGTAGCCCAT
GACTTCACATGTTTCCACAGCGCGATGAGGGAGTAGCAACGGGCCAGGAGGATGCAACCTTAATGTCTCTTTCAGACAAGCATCCAAGTATGGCA
TGTTCGTCAAGTCAGATTCCCTTATTATAACGTCTTTATCTCCTACTACGTTTGCAATTTCATCGCGGAGTTTTGTTAAGCATTGATGATTTTTC
AAGAGCTCCACAAGCATCCATTCACTTGTAACAATTGTGGTTTCTGTCCCGGCTCCAAATAATTCCTATAAAAAGGAAATGAAAACAATACTACT
TGATTGACCTTTGTACGTACAGTTACTGAAAATATTTTTCAAAAGTTTTAACTAACTGAAGATGAAAAAATTGGAAACATATCGAAGATGACGTA
CCATAAGCAATGCATTGATATGTTTATCAGTGAAACCATTTTTAACCAAAGCATCAACAAAATCTACAGCATCCATAGAAGTTTGACTCTCTCTT
TTTCTTCTCTCCTGAACGACGCCAGCCCAAACAACAGACGTTTTATTGAACAAATCCATGATTTTCTTGTATGTTCTCTGGAAATTCATACTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E427525] | SGN-U297156 | Solanum tuberosum | Build 4 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T279662 [Download] [View] | Facility Assigned ID: STMHI60TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.970 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 20.5 |