EST details — SGN-E538087

Search information 
Request: 538087Match: SGN-E538087
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189145Clone name: TUS-57-A15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46895 [cLEI-14-A22] Trace: SGN-T82697 EST: SGN-E265487 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E538087Length: 454 bp (861 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538087 [] (trimmed) AAAAAAGTTTTACTTTCTTTTTCTAATTTCAATCAAACTTTAGGGAAAAAGTTTTTACTTACACCCCCCAACGTTGGGGTTGTACATACCCCCGG
AAACAAAATTTTTTTTCTAGCTATGCCAATTTACATGGGGGGAATAAACATGCCAAAATTTGTAGAAAAAAAACAAATTTTCCTGGGAAATGGAA
CTAGCAATTGAGAAAAATCCATTTGCATATACCAGCTCGGTACTATTTACTTCGAACATCAGGCCCCCATTTGCGGAAAGTTTGATCATCCCTTG
CTGAAACTAGCATTTTAGGCCCTTTAGGATTCCCCCTCCCAGAGTTCCCAGTCATTGAATGGCCCCACAAGATCTCCATAGGGTTTGTACCCCCG
CGATTCCCTTTGTACACCTTTGAATCTTCACCACCACCGGCGAAAAAAAGGGTGGCCAATCCCCCAAAAAAGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538087] SGN-U586796 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T338962 [Download][View] Facility Assigned ID: TUS57A15_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0242 Quality Trim Threshold: 14.5