EST details — SGN-E538197

Search information 
Request: 538197Match: SGN-E538197
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189217Clone name: TUS-57-D15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C47345 [cLEI-15-O4] Trace: SGN-T83103 EST: SGN-E268156 Direction: 5' Facility: TIGR
Clone: SGN-C189217 [TUS-57-D15] Trace: SGN-T339075 EST: SGN-E538200 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E538197Length: 717 bp (890 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538197 [] (trimmed) ATCAATGTCAATTTTAATTAAACACATGACCACTATTTATTCGTTTCTTCTAGTTATAACATCTTGTGGATCATGTATCAACCTACAGTCTGAAT
ATCACAGAATTTATGTAGTGAAAATGGAGGATCAAAAATAGAAGCCTCATTGAGAATGACATTTGCTGTGATTTTGTTTGCTGCTTCAGTGGCAT
GTATCCCATCCCAGCTCACATAATTGTATGGATCCTCACATGCTGTAGCTGACAATGTTTGTCCATTTATCTCTTTGGTATTTCCACAGTATACT
TCTTGGTTAAAGTTGTAAGAACCACCTCCTTGTCCACAACATGCTTTGTTTCCATATTTTAACCCATGTGAAGTGGGGTGTTGGAAAAGTTCCAA
GAGGACAGCATGAGTGTCCACATAAATAACATTTGCATCTGAAAGATCTTTTCTTGTTTGTGCCAATGCATCTTTAAGCATATTGTTATAGTCCA
CAACTGCATTGTTGTATGATATCAAGCATCCATACTCATCAATATCAGAACTTTCATGAGGGAGCTTTACCAAAAATGCTGGGTAACATCCAATT
GGTGCAAGGTTAAGTACCAAAAATGTTCTTCCCCCTAATCCATAGATTTCCTTGATAGTGCTAGCAATTTGGGAAACTACTTGAGGTAAGTACTC
CTTCACTCCACCTATTACTTTACTTCCCAACTCACCACTGGAGTCATTCTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538197] SGN-U567412 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339072 [Download][View] Facility Assigned ID: TUS57D15_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.952 Expected Error Rate: 0.0095 Quality Trim Threshold: 14.5