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EST details — SGN-E538446

Search information 
Request: 538446Match: SGN-E538446
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189382Clone name: TUS-57-K12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C61682 [cLEM-19-C16] Trace: SGN-T86233 EST: SGN-E272235 Direction: 5' Facility: TIGR
Clone: SGN-C189382 [TUS-57-K12] Trace: SGN-T339322 EST: SGN-E538447 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E538446Length: 716 bp (912 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538446 [] (trimmed) AAACAACAAAAAAAAGTTATTACCCCTTTATTATTATAATAAACTAGAGATCAAATCTCATATCATCTTTAATCAAACCATGACAAACTGAACCC
TGGACAAGATTACACACATAGCTTTAAAAAAAAACTATGTAAAATATCCCACCCGACCACCTAGACCTAGGCATATATTAATATTAACATATGCC
CTCATTGTAACCATATTATATTAAAATATAGTTTTAGTAATAATAATAGTAGCAGTAAATAAAATACTCAACTAAAAAACACAATAAACACAACC
AAATTTCAATATAAAAAAAAAAAAAAACCATCATTCATCAACCATTTGAATTTTACTCTTCAACTTTCTCTGGCTCCTCAGATGCAGGGGCAGAT
TCCTCTGTTTTCTCTGCTTCGGGTTCTGCAACTGGGGCTGCTTCGGGTTCAGCTACGGGTGCTGGAGCCTCCTCAACGGGTGCTGCAGCAACCGG
TTCCTCAGCTGCGGCTGCAGGTTCTTCTGCAGCCACAGGTTCTTCAACTGGAGCTGCAACAGGTTCTGCTGCAACTGCCACTGGCTCTTCTGATT
CTGCGGCTACAGGTTCTGCAGCCGCAGGCTCTTCAGCTACAGGGGCTGCTACTTCCTCCGCAGCAGGAGCAGCCTCTTCTGGTGCTGGTGCTGAT
TCGACCTCAACATCCTTTTCTACAGCGGGGGCTGGTTCCTCCGCCTGTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538446] SGN-U581194 Tomato 200607 Build 2 457 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339321 [Download][View] Facility Assigned ID: TUS57K12_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0027 Quality Trim Threshold: 14.5