EST details — SGN-E538781

Search information 
Request: 538781Match: SGN-E538781
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189593Clone name: TUS-58-D7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C66861 [cLEN-16-G19] Trace: SGN-T90694 EST: SGN-E274971 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E538781Length: 1655 bp (untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538781 [] (untrimmed)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTTNNNNTTNCNNTTTTNTTCNCCAAT
GCCGTTNNCCCTTTGGGTGGAGTTNNNNNNNNNACGAATTGTGTAAAACGAGAGGNCCCCGCCGCCGCGAAGAAGAGTTTATNNCTACANAACAA
AAGAGAGGGAGGGGCAAGNCACAAAGAGAACATGTATCCTCCTTATATGAATGAGAAATGTCTAATCACAGAGGAGTATAATACTTGACCAATTG
ATATCTCTCTCGTTACGCAGTCGTTGACGTTTACTGAGAATACGATTGTAACCCTGCAGTCTGTCTCTTGCTCCTTCCACCTATGATGTTGGGAT
ACACACGGGCATATCAAGGAAGCTGGTAATACAGGCATCGCAGCCATCTACCTTATTTATCGCCTCTCTACTCAGTATATCATAGTATGAGAGAC
CACTTAGTCCTCTCCTCCGGGCGGTTGTTACACCCTGTGATGGGGCGGAGTGCGTTGTTATCGTGGATGATATCTCTTGTGAAGCAGTGTAATCT
CGCTCGTACAGTCGATCACCGCTACTGCACTGTCTCAGGTAATTATATAGCACCTAGTGTACGATATCTGTGGATATGAGAACGTCGCGTTCCCA
ACGCGAGTACCTCTCTGACTCTCTAGCTGTCATACGTTGTTTGATAGATCCCGAGAGATAACTCATAGACTCACTGAGCGGGTGTGGTGAGCGAG
GTAAATATCTCTTACGACTATTGGTGCTACGACGCCGTCTTATATTATTTAGTGTACGAGTATACTTATAGTAGAGATGTGNTTTTATATTATGT
TTCATGTATAAGGTGTGAGAGACAGATAGCGTATGAGCTGGATGTAGGTCTGACAAGTACTGTTAGTATATATGTATATATTCTTGTAGACCGAG
CAGTGCAATACAGTTAGTGGTTTGTCTCAGTCCGTTCGTATGGATTTTCATAGCGTACCCATGTTTATTGGCTCCCTGCGCTCTGGCATAATCTA
TTATTATTATTTGATATTATGAACGTGCTAGCTCCACGTTAGACGTGACGCTGTGTTGAATCATACCCTCATCCTCCAATATTCTACTCATCGTG
TATCTATGTTATGTCGAGATAATGCTCGCATTTCTATTTAGGCAGCTGTCACGGCGGCGGTATATATTTTCAAGTATATGAAGATGAGAGGTAGT
GCAGANGTGATAGTTGGCGCGGCAAGTGGCTTTGTCGAAGGTAGAGTATCTCGATACGGAGTTGGAGGACACTCTAATTAGACACTGCGTTGACG
ACTATTAATACCGAAAGNTGANCCTTTGCTGATAATCNTCATATACAATCAGACATATCACGTTGAGTATAGAAAAATATAGATATAGTCGCGAA
TCACTTGTCGTGACACGTACGCTGGTGTCGCTTTGACGACGCGCGATGAATGTGAGCCAACGTAGTGTGAGATAGTTCAGATGTGTAGTAGTCGA
ACGAGTGCGCGTATCGCTCATCTGAGTATCATATAGCATGGGACTCCGANTATTATGTATCGCTCGCTCACGCTATGCGTGAGCCATGAGTGATG
ATGNTCTTCGTCACGNGTATGNCCATGTATGATCGATGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T339656 [Download][View] Facility Assigned ID: TUS58D07_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Problems: High expected error (low overall quality)
Sequence Entropy: 0.000 Expected Error Rate: 0.0266 Quality Trim Threshold: 20.5