EST details — SGN-E539216
| Search information |
| Request: 539216 | Match: SGN-E539216 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189846 | Clone name: TUS-58-N20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C69688 [cLER-12-E5] | Trace: SGN-T94225 | EST: SGN-E283258 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189846 [TUS-58-N20] | Trace: SGN-T340093 | EST: SGN-E539218 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E539216 | Length: 550 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E539216 [] (trimmed)
AAACCAAATGAATAACTTAAGCTCTAAAACGAGGGGGGGGGAAGCTTTTTTAAACAAATAAAAGGGCAAAAAGAAGGGTTTCTAAATCCCCAAAA
AAAGCCAACGGCCCCCTAGGTTTTAAAGGTAGCGCGGCACCCCCGGCTTTTTTTCCTAAGCCAACCCCCAAACCCCCAGGGACAAAATCAGTTTT
GCCCTTCACATTTTGACTACAATGGGCAAAATGAACATGGGCCTGGGGGGAATCCCGGTTATTGTTGCTTATATTGAAAACAAGATGGCCCTTTC
CTTTGATCTGAAAAAAATGGCCGGGGCCCTTTTTCATACTTAAACTGGGAGGAATCTGCATTTTTCCAATCCCTTCGGACTCAACCGATTTTTCA
ACACACCCAATGTCTTCGTTGTAACCCTTTTTCAAAAAATCTGAACAGTTTTTTTTTCCCCCCTGATCTTTTGGATTACGGAATCGACCCCCTGG
TCCTCTGAGGTAACCTGGGGCCAAATTCCTGCAGCCCGGGGGATCCCCTATTTTTAAAGGGGCCCCCCCCCCGGG
AAAGCCAACGGCCCCCTAGGTTTTAAAGGTAGCGCGGCACCCCCGGCTTTTTTTCCTAAGCCAACCCCCAAACCCCCAGGGACAAAATCAGTTTT
GCCCTTCACATTTTGACTACAATGGGCAAAATGAACATGGGCCTGGGGGGAATCCCGGTTATTGTTGCTTATATTGAAAACAAGATGGCCCTTTC
CTTTGATCTGAAAAAAATGGCCGGGGCCCTTTTTCATACTTAAACTGGGAGGAATCTGCATTTTTCCAATCCCTTCGGACTCAACCGATTTTTCA
ACACACCCAATGTCTTCGTTGTAACCCTTTTTCAAAAAATCTGAACAGTTTTTTTTTCCCCCCTGATCTTTTGGATTACGGAATCGACCCCCTGG
TCCTCTGAGGTAACCTGGGGCCAAATTCCTGCAGCCCGGGGGATCCCCTATTTTTAAAGGGGCCCCCCCCCCGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E539216] | SGN-U590410 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T340091 [Download][View] | Facility Assigned ID: TUS58N20_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.899 | Expected Error Rate: 0.0219 | Quality Trim Threshold: 12.5 |
Working
